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Intracellular Multicomponent Synchronous DNA-Walking Strategy for the Simultaneous Quantification of Tumor-Associated Proteins in a Single Cell

Shengyu Chen, Jingjin Zhao, Chunhuan Xu, Liangliang Zhang, Bingfang Shi, Jianniao Tian, Shulin Zhao

2022Analytical Chemistry18 citationsDOI

Abstract

Single-cell protein analysis is very important for understanding cellular heterogeneity and single-cell biology. However, owing to the extremely low levels of some tumor-associated proteins in individual cells, the absolute quantification of such tumor-associated proteins in a single cell remains a challenge. Herein, an intracellular multicomponent synchronous DNA-walking strategy is proposed for the simultaneous quantification of multiple tumor-associated proteins in a single cell. In this strategy, a nanoprobe based on a DNA walker was designed for the simultaneous signal amplification of nucleolin (NCL) and thymidine kinase 1 (TK1) in a single cell. NCL and TK1 in single cells were simultaneously detected on a microchip platform with detection limits of 1.0 and 0.8 pM, respectively. The results obtained from 20 liver cancer cells (HepG2) and 20 normal hepatocytes (HL-7702) indicated that NCL and TK1 were overexpressed in liver cancer cells. However, the levels of NCL and TK1 in normal hepatocytes are only about one-tenth to one-sixth of those in hepatic carcinoma. Using different nucleic acid aptamers, the proposed strategy can be applied for the analysis of other single-cell proteins and in the early diagnosis of cancer.

Topics & Concepts

NucleolinChemistryIntracellularCellSingle-cell analysisCancer cellDNANanoprobeAptamerMolecular biologyNucleic acidLiver cancerCell biologyBiochemistryCancer researchCancerHepatocellular carcinomaCytoplasmBiologyNanotechnologyGeneticsMaterials scienceNucleolusNanoparticleAdvanced biosensing and bioanalysis techniquesSingle-cell and spatial transcriptomicsMicrofluidic and Bio-sensing Technologies
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