Litcius/Paper detail

Z’ Does Not Need to Be > 0.5

Haim Bar, Adam Zweifach

2020SLAS DISCOVERY29 citationsDOIOpen Access PDF

Abstract

The assay metric Z' has come to play a critical gatekeeping role in determining whether high-throughput assays can be performed. While Z' is commonly required to be > 0.5, this expectation is not well supported. Requiring Z' > 0.5 likely prevents many potentially useful phenotypic and cell-based screens from being conducted, and causes other assays to be conducted under extreme conditions that may prevent activity from being found. We used power analysis and a novel numerical simulation approach to determine how Z' reflects assay performance under a variety of conditions. Our results show that assays with Z' > 0.5 perform better than assays with lower Z', but when an appropriate threshold is selected, assays with Z' < 0.5 can almost always find useful compounds without generating too many false positives. We provide a method that will allow researchers to estimate how to set an appropriate threshold for their assay. We suggest that instead of always requiring Z' > 0.5, assays with Z' < 0.5 should be performed when they can be justified in terms of the importance of the target and the limitations of alternate assay formats.

Topics & Concepts

False positive paradoxMetric (unit)Computer scienceSet (abstract data type)GatekeepingVariety (cybernetics)Computational biologyBiologyMachine learningArtificial intelligenceProgramming languageEngineeringPolitical scienceOperations managementLawCell Image Analysis TechniquesComputational Drug Discovery MethodsGene Regulatory Network Analysis
Z’ Does Not Need to Be &gt; 0.5 | Litcius