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DFT‐Guided Discovery of Ethynyl‐Triazolyl‐Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling

Christian E. Stieger, Y.H. Park, Mark A. R. de Geus, Dongju Kim, Christiane Huhn, J. Sophia Slenczka, Philipp Ochtrop, Judith M. Müchler, Roderich D. Süßmuth, Johannes Broichhagen, Mu‐Hyun Baik, Christian P. R. Hackenberger

2022Angewandte Chemie International Edition31 citationsDOIOpen Access PDF

Abstract

Abstract We report the density functional theory (DFT) guided discovery of ethynyl‐triazolyl‐phosphinates (ETPs) as a new class of electrophilic warheads for cysteine selective bioconjugation. By using Cu I ‐catalysed azide alkyne cycloaddition (CuAAC) in aqueous buffer, we were able to access a variety of functional electrophilic building blocks, including proteins, from diethynyl‐phosphinate. ETP‐reagents were used to obtain fluorescent peptide‐conjugates for receptor labelling on live cells and a stable and a biologically active antibody‐drug‐conjugate. Moreover, we were able to incorporate ETP‐electrophiles into an azide‐containing ubiquitin under native conditions and demonstrate their potential in protein–protein conjugation. Finally, we showcase the excellent cysteine‐selectivity of this new class of electrophile in mass spectrometry based, proteome‐wide cysteine profiling, underscoring the applicability in homogeneous bioconjugation strategies to connect two complex biomolecules.

Topics & Concepts

BioconjugationCysteineChemistryCombinatorial chemistryElectrophileAzideBiomoleculeConjugateChemical biologyPeptideDrug discoveryClick chemistryBiochemistryOrganic chemistryMathematical analysisEnzymeMathematicsCatalysisClick Chemistry and ApplicationsChemical Synthesis and AnalysisProtein Degradation and Inhibitors