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Deconvolution of 1D NMR spectra: A deep learning-based approach

Nicola B. Schmid, Simon Bruderer, Federico M. Paruzzo, Giulia Fischetti, G. Toscano, D. Graf, Matthias Fey, Andreas Henrici, V. Ziebart, Björn Heitmann, Helmut Gräbner, Jan Dirk Wegner, R.K.O. Sigel, D. Wilhelm

2022Journal of Magnetic Resonance79 citationsDOIOpen Access PDF

Abstract

The analysis of nuclear magnetic resonance (NMR) spectra to detect peaks and characterize their parameters, often referred to as deconvolution, is a crucial step in the quantification, elucidation, and verification of the structure of molecular systems. However, deconvolution of 1D NMR spectra is a challenge for both experts and machines. We propose a robust, expert-level quality deep learning-based deconvolution algorithm for 1D experimental NMR spectra. The algorithm is based on a neural network trained on synthetic spectra. Our customized pre-processing and labeling of the synthetic spectra enable the estimation of critical peak parameters. Furthermore, the neural network model transfers well to the experimental spectra and demonstrates low fitting errors and sparse peak lists in challenging scenarios such as crowded, high dynamic range, shoulder peak regions as well as broad peaks. We demonstrate in challenging spectra that the proposed algorithm is superior to expert results.

Topics & Concepts

DeconvolutionSpectral lineNMR spectra databaseArtificial neural networkComputer scienceArtificial intelligenceRange (aeronautics)Biological systemPattern recognition (psychology)Two-dimensional nuclear magnetic resonance spectroscopyNuclear magnetic resonanceAlgorithmMaterials sciencePhysicsAstronomyComposite materialBiologyMetabolomics and Mass Spectrometry StudiesNMR spectroscopy and applicationsAdvanced MRI Techniques and Applications
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