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Structural property, molecular regulation, and functional diversity of glutamine synthetase in higher plants: a data‐mining bioinformatics approach

Raju Mondal, Amit Kumar, Sanjib Kumar Chattopadhyay

2021The Plant Journal43 citationsDOIOpen Access PDF

Abstract

Summary Glutamine synthetase (GS; E.C.6.3.1.2) is a key enzyme in higher plants with two isozymes, cytosolic GS1 and plastidic GS2, and involves in the assimilation and recycling of NH 4 + ions and maintenance of complex traits such as crop nitrogen‐use efficiency and yield. Our present understanding of crop nitrogen‐use efficiency and its correlation with the functional role of the GS family genes is inadequate, which delays harnessing the benefit of this key enzyme in crop improvement. In this report, we performed a comprehensive investigation on the phylogenetic relationship, structural properties, complex multilevel gene regulation, and expression patterns of the GS genes to enrich present understanding about the enzyme. Our Gene Ontology and protein–protein interactions analysis revealed the functional aspects of GS isozymes in stress mitigation, aging, nucleotide biosynthesis/transport, DNA repair and response to metals. The insight gained here contributes to the future research strategies in developing climate‐smart crops for global sustainability.

Topics & Concepts

Glutamine synthetaseBiologyGeneComputational biologyIsozymePhylogenetic treeBiotechnologyEnzymeBiochemistryGlutamineAmino acidPlant nutrient uptake and metabolismNitrogen and Sulfur Effects on BrassicaPlant Micronutrient Interactions and Effects
Structural property, molecular regulation, and functional diversity of glutamine synthetase in higher plants: a data‐mining bioinformatics approach | Litcius