Litcius/Paper detail

A Spatiotemporal Epidemiological Prediction Model to Inform County-Level COVID-19 Risk in the United States

Yiwang Zhou, Lili Wang, Leyao Zhang, Lan Shi, Kangping Yang, Jie He, Bangyao Zhao, William Overton, Soumik Purkayastha, Peter X.‐K. Song

2020Harvard Data Science Review54 citationsDOIOpen Access PDF

Abstract

As the COVID-19 pandemic continues worsening in the United States, it is of critical importance to develop a health information system that provides timely risk evaluation and prediction of the COVID-19 infection in communities. We propose a spatiotemporal epidemiological forecast model that combines a spatial cellular automata (CA) with a temporal extended susceptible-antibody-infectious-removed (eSAIR) model under timevarying state-specific control measures. This new toolbox enables the projection of the county-level COVID-19 prevalence over 3109 counties in the continental United States, including -day-ahead risk forecast and the risk related to a travel route. In comparison to the existing temporal risk prediction models, the proposed CA-eSAIR model informs the projected county-level risk to governments and residents of the local coronavirus spread patterns and the associated personal risks at specific geolocations. Such high-resolution risk projection is useful for decision-making on business reopening and resource allocation for COVID-19 tests.

Topics & Concepts

Coronavirus disease 2019 (COVID-19)2019-20 coronavirus outbreakEpidemiologySevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Spatial epidemiologyGeographyEnvironmental healthVirologyMedicineOutbreakDiseaseInfectious disease (medical specialty)Internal medicinePathologyData-Driven Disease SurveillanceCOVID-19 epidemiological studies