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Generation of a more efficient prime editor 2 by addition of the Rad51 DNA-binding domain

Myungjae Song, Jung Min Lim, Seonwoo Min, Jeongseok Oh, Dong Young Kim, Jae‐Sung Woo, Hiroshi Nishimasu, Sung‐Rae Cho, Sungroh Yoon, Seokjoong Kim

2021Nature Communications86 citationsDOIOpen Access PDF

Abstract

Although prime editing is a promising genome editing method, the efficiency of prime editor 2 (PE2) is often insufficient. Here we generate a more efficient variant of PE2, named hyPE2, by adding the Rad51 DNA-binding domain. When tested at endogenous sites, hyPE2 shows a median of 1.5- or 1.4- fold (range, 0.99- to 2.6-fold) higher efficiencies than PE2; furthermore, at sites where PE2-induced prime editing is very inefficient (efficiency < 1%), hyPE2 enables prime editing with efficiencies ranging from 1.1% to 2.9% at up to 34% of target sequences, potentially facilitating prime editing applications.

Topics & Concepts

RAD51Prime (order theory)Computational biologyDNADomain (mathematical analysis)Computer scienceBiologyGeneticsDNA damageMathematicsCombinatoricsMathematical analysisCRISPR and Genetic EngineeringProtein Degradation and InhibitorsGenetics and Neurodevelopmental Disorders
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