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Efficient Inhibition of SARS‐CoV‐2 Using Chimeric Antisense Oligonucleotides through RNase L Activation**

Xiaoxuan Su, Wenxiao Ma, Di Feng, Boyang Cheng, Qian Wang, Zefeng Guo, Demin Zhou, Xinjing Tang

2021Angewandte Chemie International Edition50 citationsDOIOpen Access PDF

Abstract

Abstract There is an urgent need to develop antiviral drugs and alleviate the current COVID‐19 pandemic. Herein we report the design and construction of chimeric oligonucleotides comprising a 2′‐OMe‐modified antisense oligonucleotide and a 5′‐phosphorylated 2′‐5′ poly(A) 4 (4A 2‐5 ) to degrade envelope and spike RNAs of SARS‐CoV‐2. The oligonucleotide was used for searching and recognizing target viral RNA sequence, and the conjugated 4A 2‐5 was used for guided RNase L activation to sequence‐specifically degrade viral RNAs. Since RNase L can potently cleave single‐stranded RNA during innate antiviral response, degradation efficiencies with these chimeras were twice as much as those with only antisense oligonucleotides for both SARS‐CoV‐2 RNA targets. In pseudovirus infection models, chimera‐S4 achieved potent and broad‐spectrum inhibition of SARS‐CoV‐2 and its N501Y and/or Δ H 69/Δ V 70 mutants, indicating a promising antiviral agent based on the nucleic acid‐hydrolysis targeting chimera (NATAC) strategy.

Topics & Concepts

OligonucleotideRNase HSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Coronavirus disease 2019 (COVID-19)RNase PVirologyMolecular biology2019-20 coronavirus outbreakBiologyChemistryComputational biologyGeneticsRNAMedicineGeneInfectious disease (medical specialty)PathologyDiseaseOutbreakRNA Interference and Gene DeliveryCRISPR and Genetic EngineeringAdvanced biosensing and bioanalysis techniques