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Copy number variations and multiallelic variants in Korean patients with Leber congenital amaurosis.

Dongheon Surl, Saeam Shin, Seung‐Tae Lee, Jong Rak Choi, Junwon Lee, Suk Ho Byeon, Sueng‐Han Han, Hyun Taek Lim, Jinu Han

2020PubMed22 citationsOpen Access PDF

Abstract

Purpose: We comprehensively evaluated the mutational spectrum of Leber congenital amaurosis (LCA) and investigated the molecular diagnostic rate and genotype-phenotype correlation in a Korean cohort. Methods: This single-center retrospective case series included 50 Korean patients with LCA between June 2015 and March 2019. Molecular analysis was conducted using targeted panel-based next-generation sequencing, including deep intronic and regulatory variants or whole exome sequencing. The molecular diagnosis was made based on the inheritance pattern, zygosity, and pathogenicity. Results: Senior-Løken syndrome for early preparation for kidney and liver transplantations. Conclusions: This study demonstrated that approximately 4% of patients may have dual molecular diagnoses, and 6% were surgically or medically actionable in LCA. Therefore, accurate molecular diagnosis and careful interpretation of next-generation sequencing results can be of great help in patients with LCA.

Topics & Concepts

Multiplex ligation-dependent probe amplificationJoubert syndromeGeneticsCompound heterozygosityCopy-number variationGenetic heterogeneityExome sequencingPolydactylyMedicineCohortBiologyBioinformaticsGeneInternal medicinePhenotypeGenomeExonGenetic and Kidney Cyst DiseasesOrgan Transplantation Techniques and OutcomesGenomics and Rare Diseases