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Post-GWAS functional analysis identifies CUX1 as a regulator of p16INK4a and cellular senescence

Danli Jiang, Wei Sun, Ting Wu, Meijuan Zou, Sathish Babu Vasamsetti, Xiaoyu Zhang, Yihan Zhao, Julie A. Phillippi, Amr H. Sawalha, Sina Tavakoli, Partha Dutta, Jonathan Florentin, Stephen Y. Chan, Tammy Tollison, Di Wu, Jing Cui, Ian Huntress, Xinxia Peng, Toren Finkel, Gang Li

2022Nature Aging24 citationsDOIOpen Access PDF

Abstract

Abstract Accumulation of senescent cells with age is an important driver of aging and age-related diseases. However, the mechanisms and signaling pathways that regulate senescence remain elusive. In this report, we performed post-genome-wide association studies (GWAS) functional studies on the CDKN2A/B locus, a locus known to be associated with multiple age-related diseases and overall human lifespan. We demonstrate that transcription factor CUX1 (Cut-Like Homeobox 1) specifically binds to an atherosclerosis-associated functional single-nucleotide polymorphism (fSNP) (rs1537371) within the locus and regulates the CDKN2A/B- encoded proteins p14 ARF , p15 INK4b and p16 INK4a and the antisense noncoding RNA in the CDK4 (INK4) locus (ANRIL) in endothelial cells (ECs). Endothelial CUX1 expression correlates with telomeric length and is induced by both DNA-damaging agents and oxidative stress. Moreover, induction of CUX1 expression triggers both replicative and stress-induced senescence via activation of p16 INK4a expression. Thus, our studies identify CUX1 as a regulator of p16 INK4a -dependent endothelial senescence and a potential therapeutic target for atherosclerosis and other age-related diseases.

Topics & Concepts

Cellular senescenceSenescenceRegulatorMaster regulatorGenome-wide association studyComputational biologyBiologyCell biologyGeneticsPhenotypeTranscription factorGeneSingle-nucleotide polymorphismGenotypeTelomeres, Telomerase, and SenescenceUbiquitin and proteasome pathwaysEpigenetics and DNA Methylation