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Efficient in vivo prime editing corrects the most frequent phenylketonuria variant, associated with high unmet medical need

Dominique L. Brooks, Madelynn N. Whittaker, Ping Qü, Kiran Musunuru, Rebecca C. Ahrens‐Nicklas, Xiao Wang

2023The American Journal of Human Genetics40 citationsDOIOpen Access PDF

Abstract

The c.1222C>T (p.Arg408Trp) variant in the phenylalanine hydroxylase gene (PAH) is the most frequent cause of phenylketonuria (PKU), the most common inborn error of metabolism. This autosomal-recessive disorder is characterized by accumulation of blood phenylalanine (Phe) to neurotoxic levels. Using real-world data, we observed that despite dietary and medical interventions, most PKU individuals harboring at least one c.1222C>T variant experience chronic, severe Phe elevations and do not comply with Phe monitoring guidelines. Motivated by these findings, we generated an edited c.1222C>T hepatocyte cell line and humanized c.1222C>T mouse models, with which we demonstrated efficient in vitro and in vivo correction of the variant with prime editing. Delivery via adeno-associated viral (AAV) vectors reproducibly achieved complete normalization of blood Phe levels in PKU mice, with up to 52% whole-liver corrective PAH editing. These studies validate a strategy involving prime editing as a potential treatment for a large proportion of individuals with PKU.

Topics & Concepts

In vivoPhenylalanine hydroxylasePhenylalanineMedicineInternal medicineBioinformaticsBiologyBiochemistryGeneticsAmino acidCRISPR and Genetic EngineeringRNA and protein synthesis mechanismsMetabolism and Genetic Disorders