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Binary peptide coacervates as an active model for biomolecular condensates

Shoupeng Cao, Peng Zhou, Guizhi Shen, Tsvetomir Ivanov, Xuehai Yan, Katharina Landfester, Lucas Caire da Silva

2025Nature Communications47 citationsDOIOpen Access PDF

Abstract

Biomolecular condensates formed by proteins and nucleic acids are critical for cellular processes. Macromolecule-based coacervate droplets formed by liquid-liquid phase separation serve as synthetic analogues, but are limited by complex compositions and high molecular weights. Recently, short peptides have emerged as an alternative component of coacervates, but tend to form metastable microdroplets that evolve into rigid nanostructures. Here we present programmable coacervates using binary mixtures of diphenylalanine-based short peptides. We show that the presence of different short peptides stabilizes the coacervate phase and prevents the formation of rigid structures, allowing peptide coacervates to be used as stable adaptive compartments. This approach allows fine control of droplet formation and dynamic morphological changes in response to physiological triggers. As compartments, short peptide coacervates sequester hydrophobic molecules and enhance bio-orthogonal catalysis. In addition, the incorporation of coacervates into model synthetic cells enables the design of Boolean logic gates. Our findings highlight the potential of short peptide coacervates for creating adaptive biomimetic systems and provide insight into the principles of phase separation in biomolecular condensates.

Topics & Concepts

CoacervatePeptideMacromoleculeChemistryPhase (matter)NanotechnologyCombinatorial chemistryBiophysicsMaterials scienceBiochemistryBiologyOrganic chemistryRNA Research and SplicingSupramolecular Self-Assembly in MaterialsRNA modifications and cancer
Binary peptide coacervates as an active model for biomolecular condensates | Litcius