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Halogen Bond-Assisted Supramolecular Dimerization of Pyridinium-Fused 1,2,4-Selenadiazoles via Four-Center Se2N2 Chalcogen Bonding

Evgeny A. Dukhnovsky, Alexander S. Novikov, Alexey S. Kubasov, А. В. Борисов, Nkumbu Donovan Sikaona, Anatoly A. Kirichuk, Victor N. Khrustalev, Andreii S. Kritchenkov, Alexander G. Tskhovrebov

2024International Journal of Molecular Sciences13 citationsDOIOpen Access PDF

Abstract

The synthesis and structural characterization of α-haloalkyl-substituted pyridinium-fused 1,2,4-selenadiazoles with various counterions is reported herein, demonstrating a strategy for directed supramolecular dimerization in the solid state. The compounds were obtained through a recently discovered 1,3-dipolar cycloaddition reaction between nitriles and bifunctional 2-pyridylselenyl reagents, and their structures were confirmed by the X-ray crystallography. α-Haloalkyl-substituted pyridinium-fused 1,2,4-selenadiazoles exclusively formed supramolecular dimers via four-center Se···N chalcogen bonding, supported by additional halogen bonding involving α-haloalkyl substituents. The introduction of halogens at the α-position of the substituent R in the selenadiazole core proved effective in promoting supramolecular dimerization, which was unaffected by variation of counterions. Additionally, the impact of cocrystallization with a classical halogen bond donor C6F3I3 on the supramolecular assembly was investigated. Non-covalent interactions were studied using density functional theory calculations and topological analysis of the electron density distribution, which indicated that all ChB, XB and HB interactions are purely non-covalent and attractive in nature. This study underscores the potential of halogen and chalcogen bonding in directing the self-assembly of functional supramolecular materials employing 1,2,4-selenadiazoles derived from recently discovered cycloaddition between nitriles and bifunctional 2-pyridylselenyl reagents.

Topics & Concepts

ChalcogenSupramolecular chemistryChemistryHalogen bondBifunctionalSynthonPyridiniumMoietySupramolecular assemblyHalogenCovalent bondCycloadditionSupramolecular polymersStereochemistryCrystallographyMoleculeOrganic chemistryAlkylCatalysisCrystallography and molecular interactionsOrganic Chemistry Cycloaddition ReactionsOrganoselenium and organotellurium chemistry
Halogen Bond-Assisted Supramolecular Dimerization of Pyridinium-Fused 1,2,4-Selenadiazoles via Four-Center Se2N2 Chalcogen Bonding | Litcius