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CentIER: Accurate centromere identification for plant genomes

Dong Xu, Jinbao Yang, Huaming Wen, Wenle Feng, Xiaohui Zhang, Xingqi Hui, Junyang Yue, Yun Xu, Fei Chen, Weihua Pan

2024Plant Communications34 citationsDOIOpen Access PDF

Abstract

This paper introduces CentIER, the first bioinformatic tool designed to detect complete centromeric regions without additional wet experiments. The accuracy of CentIER was validated on diverse plant genomes such as Arabidopsis, rice, maize and mulberry, and the results show that CentIER can perform significantly more complete and accurate detection than the existing tool.

Topics & Concepts

CentromereIdentification (biology)GenomeComputational biologyBiologyGeneticsChromosomeBotanyGeneChromosomal and Genetic Variations
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