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Decoding and reconstructing disease relations between dry eye and depression: a multimodal investigation comprising meta-analysis, genetic pathways and Mendelian randomization

Kao-Jung Chang, Hsin-Yu Wu, Pin-Hsuan Chiang, Yu‐Tien Hsu, Pei‐Yu Weng, T. J. Yu, Cheng-Yi Li, Yu‐Hsiang Chen, He-Jhen Dai, Han-Ying Tsai, Yu-Jung Chang, You‐Ren Wu, Yi‐Ping Yang, Cheng‐Ta Li, Chih‐Chien Hsu, Shih‐Jen Chen, Yu‐Chun Chen, Ching‐Yu Cheng, Ai‐Ru Hsieh, Shih‐Hwa Chiou

2024Journal of Advanced Research14 citationsDOIOpen Access PDF

Abstract

INTRODUCTION: The clinical presentations of dry eye disease (DED) and depression (DEP) often comanifest. However, the robustness and the mechanisms underlying this association were undetermined. OBJECTIVES: To this end, we set up a three-segment study that employed multimodality results (meta-analysis, genome-wide association study [GWAS] and Mendelian randomization [MR]) to elucidate the association, common pathways and causality between DED and DEP. METHODS: A meta-analysis comprising 26 case-control studies was first conducted to confirm the DED-DEP association. Next, we performed a linkage disequilibrium (LD)-adjusted GWAS and targeted phenotype association study (PheWAS) in East Asian TW Biobank (TWB) and European UK Biobank (UKB) populations. Single-nucleotide polymorphisms (SNPs) were further screened for molecular interactions and common pathways at the functional gene level. To further elucidate the activated pathways in DED and DEP, a systemic transcriptome review was conducted on RNA sequencing samples from the Gene Expression Omnibus. Finally, 48 MR experiments were implemented to examine the bidirectional causation between DED and DEP. RESULTS: = 0.19) and pleiotropic functional genes contributed to phenotypes in both diseases. Through protein-protein interaction and ontology convergence, we summarized the pleiotropic functional genes under the ontology of immune activation, which was further validated by a transcriptome systemic review. Importantly, the inverse variance-weighted (IVW)-MR experiments in both TWB and UKB populations (p value <0.001) supported the bidirectional exposure-outcome causation for DED-to-DEP and DEP-to-DED. Despite stringent LD-corrected instrumental variable re-selection, the bidirectional causation between DED and DEP remained. CONCLUSION: With the multi-modal evidence combined, we consolidated the association and causation between DED and DEP.

Topics & Concepts

Mendelian randomizationGenome-wide association studyGenetic architectureGenetic associationGeneticsBiologySingle-nucleotide polymorphismMeta-analysisTranscriptomeKEGGComputational biologyPhenotypeBioinformaticsGeneMedicineGenotypeGene expressionInternal medicineGenetic variantsOcular Surface and Contact LensSalivary Gland Disorders and FunctionsCircadian rhythm and melatonin
Decoding and reconstructing disease relations between dry eye and depression: a multimodal investigation comprising meta-analysis, genetic pathways and Mendelian randomization | Litcius