Complete Genome Sequence of a <i>Tomato Brown Rugose Fruit Virus</i> Isolated in the United States
Bidisha Chanda, Yazmín Rivera, Schyler O. Nunziata, Marco Galvez, Andrea Gilliard, Kai‐Shu Ling
Abstract
The complete genome sequence of a U.S. isolate of a Tomato brown rugose fruit virus (ToBRFV) (CA18-01) was obtained through Illumina and MinION sequencing. The U.S. ToBRFV isolate shared a high nucleic acid sequence identity (>99%) with known ToBRFV isolates. Phylogenetic analysis revealed a tight cluster for ToBRFV isolates throughout the world, suggesting a short evolutionary history.
Topics & Concepts
MinionBiologyPhylogenetic treeGenomeWhole genome sequencingGeneticsSequence (biology)GeneNanopore sequencingPlant Virus Research StudiesPlant Pathogenic Bacteria StudiesInsect-Plant Interactions and Control