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A third type of <scp>PETase</scp> from the marine <i>Halopseudomonas</i> lineage

Onur Turak, Andreas Gagsteiger, Ashank Upadhyay, Mark Kriegel, Peter Salein, Stefanie Böhnke‐Brandt, Seema Agarwal, Erik Borchert, Birte Höcker

2025Protein Science9 citationsDOIOpen Access PDF

Abstract

The enzymatic degradation of polyethylene terephthalate (PET) offers a sustainable solution for PET recycling. Over the past two decades, more than 100 PETases have been characterized, primarily exhibiting similar sequences and structures. Here, we report PET-degrading α/β hydrolases, including HaloPETase1 from the marine Halopseudomonas lineage, thereby extending the narrow sequence space by novel features at the active site. The crystal structure of HaloPETase1 was determined to a resolution of 1.16 Å, revealing a unique active site architecture and a lack of the canonical π-stacking clamp found in PETases so far. Further, variations in active site composition and loop structures were observed. Additionally, we found five more enzymes from the same lineage, two of which have a high similarity to type IIa bacterial PETases, while the other three resemble HaloPETase1. All these enzymes exhibited high salt tolerance ranging from 2.5 to 5 M NaCl, leading to higher total product releases upon PET degradation at 40 or 50°C. Based on these findings, we propose an extension of the existing PETase classification system to include type III PETases.

Topics & Concepts

Lineage (genetic)Active siteEnzymeBiologyType (biology)Sequence (biology)ChemistryCrystallographyFragment (logic)Evolutionary biologyLoop (graph theory)Polyethylene terephthalateSimilarity (geometry)Peptide sequenceDomain (mathematical analysis)Resolution (logic)PhysicsSequence spaceStereochemistryHydrolaseMaterials scienceProtein domainProtein structureSequence alignmentSequence analysisSpace (punctuation)Crystal (programming language)Enzyme Production and CharacterizationEnzyme Structure and FunctionAdvanced Proteomics Techniques and Applications
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