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Development and validation of a predictive model combining clinical, radiomics, and deep transfer learning features for lymph node metastasis in early gastric cancer

Qingwen Zeng, Hong Li, Yanyan Zhu, Zongfeng Feng, Xufeng Shu, Ahao Wu, Lianghua Luo, Yi Cao, Yi Tu, Jianbo Xiong, Fuqing Zhou, Zhengrong Li

2022Frontiers in Medicine41 citationsDOIOpen Access PDF

Abstract

Background: This study aims to develop and validate a predictive model combining deep transfer learning, radiomics, and clinical features for lymph node metastasis (LNM) in early gastric cancer (EGC). Materials and methods: = 167). A total of 79 patients with EGC collected from the Second Affiliated Hospital of Soochow University were used as external validation cohort. Pre-trained deep learning networks were used to extract deep transfer learning (DTL) features, and radiomics features were extracted based on hand-crafted features. We employed the Spearman rank correlation test and least absolute shrinkage and selection operator regression for feature selection from the combined features of clinical, radiomics, and DTL features, and then, machine learning classification models including support vector machine, K-nearest neighbor, random decision forests (RF), and XGBoost were trained, and their performance by determining the area under the curve (AUC) were compared. Results: We constructed eight pre-trained transfer learning networks and extracted DTL features, respectively. The results showed that 1,048 DTL features extracted based on the pre-trained Resnet152 network combined in the predictive model had the best performance in discriminating the LNM status of EGC, with an AUC of 0.901 (95% CI: 0.847-0.956) and 0.915 (95% CI: 0.850-0.981) in the internal validation and external validation cohorts, respectively. Conclusion: We first utilized comprehensive multidimensional data based on deep transfer learning, radiomics, and clinical features with a good predictive ability for discriminating the LNM status in EGC, which could provide favorable information when choosing therapy options for individuals with EGC.

Topics & Concepts

Artificial intelligenceRadiomicsDeep learningSupport vector machineFeature selectionMachine learningTransfer of learningMedicineReceiver operating characteristicRank correlationCohortCross-validationComputer scienceInternal medicineGastric Cancer Management and OutcomesCholangiocarcinoma and Gallbladder Cancer StudiesRadiomics and Machine Learning in Medical Imaging