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Non‐Covalent Interactions in the Biphenyl Crystal: Is the Planar Conformer a Transition State?

Bruno Landeros‐Rivera, Vojtěch Jančík, Rafael Moreno‐Esparza, Diego Martínez Otero, Jesús Hernández‐Trujillo

2021Chemistry - A European Journal22 citationsDOI

Abstract

A combined experimental and theoretical study of the biphenyl (BP) crystal is presented. The X-ray diffraction data collected at 100 K were subjected to Hirshfeld atom and multipole refinements of the electron density, ρ(r). A theoretical exploration of the potential energy surface (PES) of the crystal was also carried out. This investigation challenges the common assumption that the planar structure of BP in the phase I crystal is an average of two twisted configurations in a double-well potential. The theoretical computations provide compelling evidence that this structure corresponds to a minimum on the PES hence to a stable molecular arrangement. Consistently, the experiment showed no evidence of positional or dynamic disorder. The intramolecular hydrogen-hydrogen bonds detected are not repulsive. The topological analysis of the experimental and theoretical ρ(r) reveals that both the intra- and intermolecular H⋅⋅⋅H and the C-H⋅⋅⋅π contacts stabilize the BP crystal.

Topics & Concepts

Intramolecular forceIntermolecular forceMultipole expansionCrystal (programming language)BiphenylCrystallographyCrystal structureHydrogen bondPlanarChemistryConformational isomerismCrystal structure predictionChemical physicsMaterials scienceComputational chemistryMoleculePhysicsStereochemistryQuantum mechanicsOrganic chemistryComputer scienceProgramming languageComputer graphics (images)Crystallography and molecular interactionsSolid-state spectroscopy and crystallographyChemical Thermodynamics and Molecular Structure
Non‐Covalent Interactions in the Biphenyl Crystal: Is the Planar Conformer a Transition State? | Litcius