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Thermoadaptation in an Ancestral Diterpene Cyclase by Altered Loop Stability

David Hueting, Sudarsana Reddy Vanga, Per‐Olof Syrén

2022The Journal of Physical Chemistry B23 citationsDOIOpen Access PDF

Abstract

analysis revealed key differences in the flexibility of a loop capping the active site, between extant and ancestral proteins. For the modern enzyme, the loop collapses into the active site at elevated temperatures, thus preventing biocatalysis, whereas the loop remains in a productive conformation both at ambient and high temperatures in the ancestral variant. Restoring a Pro loop residue introduced in the ancestral variant to the corresponding Gly observed in the extant protein led to reduced catalytic activity at high temperatures, with only moderate effects on the melting temperature, supporting the importance of the flexibility of the capping loop in thermoadaptation. Conversely, the inverse Gly to Pro loop mutation in the modern enzyme resulted in a 3-fold increase in the catalytic rate. Despite an overall decrease in maximal activity of ancestor compared to wild type, its increased thermostability provides a robust backbone amenable for further enzyme engineering. Our work cements the importance of loops in enzyme catalysis and provides a molecular mechanism contributing to thermoadaptation in an ancestral enzyme.

Topics & Concepts

ThermostabilityExtant taxonBiologyEnzymeActive siteProtein engineeringIn silicoBiochemistryStereochemistryChemistryEvolutionary biologyGenePlant biochemistry and biosynthesisMicrobial Natural Products and BiosynthesisPhotosynthetic Processes and Mechanisms
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