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Phase Separation: Direct and Indirect Driving Force for High-Order Chromatin Organization

Xiaoli Li, Ziyang An, Wenqing Zhang, Feifei Li

2023Genes21 citationsDOIOpen Access PDF

Abstract

The multi-level spatial chromatin organization in the nucleus is closely related to chromatin activity. The mechanism of chromatin organization and remodeling attract much attention. Phase separation describes the biomolecular condensation which is the basis for membraneless compartments in cells. Recent research shows that phase separation is a key aspect to drive high-order chromatin structure and remodeling. In addition, chromatin functional compartmentalization in the nucleus which is formed by phase separation also plays an important role in overall chromatin structure. In this review, we summarized the latest work about the role of phase separation in spatial chromatin organization, focusing on direct and indirect effects of phase separation on 3D chromatin organization and its impact on transcription regulation.

Topics & Concepts

ChromatinChromatin remodelingChIA-PETCompartmentalization (fire protection)Bivalent chromatinScaffold/matrix attachment regionHistone-modifying enzymesCell biologyNucleusChromatin structure remodeling (RSC) complexBiologyGeneticsDNABiochemistryEnzymeGenomics and Chromatin DynamicsRNA Research and SplicingRNA and protein synthesis mechanisms