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Proton Transfer vs Complex Formation Channels in Ionized Formic Acid Dimer: A Direct <i>Ab Initio</i> Molecular Dynamics Study

Hiroto Tachikawa

2020The Journal of Physical Chemistry A22 citationsDOI

Abstract

Photoirradiation to a hydrogen-bonded system plays an important role in the initial DNA and enzyme damage processes. The formic acid (FA) dimer is a model compound of double proton transfer systems, such as DNA base pairs. In the present study, the reactions of the FA dimer cation, formed upon ionization of the neutral dimer, have been investigated by the direct ab initio molecular dynamics method. Two reaction channels were identified for the FA dimer cation: complex formation and proton transfer (PT). In the complex formation channel, the carbonyl oxygen atoms of the two FA monomers were bound symmetrically, and a face-to-face complex was formed. In the PT channel, the proton of FA+ was transferred to FA, forming the H+(HCOOH)--HCO2 radical cation as product. At low temperature, the complex channel was dominant, whereas the PT channel increased with increasing temperature. The asymmetric spin distribution on the FA dimer cation exhibited a strong correlation with the PT channel.

Topics & Concepts

DimerChemistryProtonAb initioFormic acidAb initio quantum chemistry methodsPhotochemistryCrystallographyMoleculeOrganic chemistryPhysicsQuantum mechanicsAdvanced Chemical Physics StudiesPhotochemistry and Electron Transfer StudiesFree Radicals and Antioxidants
Proton Transfer vs Complex Formation Channels in Ionized Formic Acid Dimer: A Direct <i>Ab Initio</i> Molecular Dynamics Study | Litcius