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Genome-wide identification and expression analysis of <i>CPP</i>-like gene family in <i>Triticum aestivum</i> L. under different hormone and stress conditions

Uzair Ullah, Zeeshan Ali Buttar, Abdullah Shalmani, Izhar Muhammad, Aziz Ud-Din, Hamid Ali

2022Open Life Sciences19 citationsDOIOpen Access PDF

Abstract

Abstract The CPP -like plant‐specific transcription factor has a prominent role in plant development and growth through cell division and differential activities. However, little information is available about the CPP gene family in Triticum aestivum L. Herein, we identified 37 and 11 CPP genes in the wheat and rice genome databases, respectively. The phylogeny of the CPP protein-like family members was further divided into five subfamilies based on structural similarities and phenotypic functional diversities. The in silico expression analysis showed that CPP genes are highly expressed in some tissues, such as shoot apex, shoot, leaf, leaf sheath, and microspore. Furthermore, the qRT-PCR found higher expression for TaCPP gene family members in leaf, leaf blade, young spike, mature spike, and differential expression patterns under abiotic stresses, including heat, drought, salt, and hormonal treatment, such as indole acetic acid and 1-aminocyclopropane-1 carboxylic acid. We found that CPP gene family members are mostly located in the nucleus after infiltrating the CPP5-1B-GFP and TaCPP11-3B-GFP into tobacco leaves. The overexpression of the TaCPP5-1D gene revealed that the CPP gene positively regulates the germanium, shoot, and root activities in Arabidopsis . The TaCPP5-1D -overexpressed plants showed less anti-oxidative sensitivity under drought stress conditions. These results demonstrated that TaCPP5-1D protein has a crucial contribution by interacting with TaCPP11-3B protein in maintaining stress homeostasis under the natural and unfavorable environmental conditions for growth, development, and stress resistance activities. Therefore, this study could be used as pioneer knowledge to further investigate the function of CPP genes in plant growth and development.

Topics & Concepts

BiologyGene familyGeneIn silicoArabidopsisShootGene expressionGeneticsAbiotic stressAbscisic acidTranscription factorGenomeArabidopsis thalianaBotanyMutantPhotosynthetic Processes and MechanismsPlant Stress Responses and ToleranceRedox biology and oxidative stress