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Unveiling Microbial Nitrogen Metabolism in Rivers using a Machine Learning Approach

Yuying Jia, Xiangang Hu, Weilu Kang, Xu Dong

2024Environmental Science & Technology94 citationsDOI

Abstract

Microbial nitrogen metabolism is a complicated and key process in mediating environmental pollution and greenhouse gas emissions in rivers. However, the interactive drivers of microbial nitrogen metabolism in rivers have not been identified. Here, we analyze the microbial nitrogen metabolism patterns in 105 rivers in China driven by 26 environmental and socioeconomic factors using an interpretable causal machine learning (ICML) framework. ICML better recognizes the complex relationships between factors and microbial nitrogen metabolism than traditional linear regression models. Furthermore, tipping points and concentration windows were proposed to precisely regulate microbial nitrogen metabolism. For example, concentrations of dissolved organic carbon (DOC) below tipping points of 6.2 and 4.2 mg/L easily reduce bacterial denitrification and nitrification, respectively. The concentration windows for NO 3 – -N (15.9–18.0 mg/L) and DOC (9.1–10.8 mg/L) enabled the highest abundance of denitrifying bacteria on a national scale. The integration of ICML models and field data clarifies the important drivers of microbial nitrogen metabolism, supporting the precise regulation of nitrogen pollution and river ecological management.

Topics & Concepts

Denitrifying bacteriaNitrogen cycleEnvironmental scienceNitrogenNitrificationMicrobial metabolismMicrobial population biologyEcologyEnvironmental chemistryDenitrificationChemistryBiologyBacteriaOrganic chemistryGeneticsWastewater Treatment and Nitrogen RemovalSoil and Water Nutrient DynamicsMarine and coastal ecosystems
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