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Genome-wide association study across five cohorts identifies five novel loci associated with idiopathic pulmonary fibrosis

Richard J. Allen, Amy Stockwell, Justin M. Oldham, Beatriz Guillén‐Guío, David A. Schwartz, Toby M. Maher, Carlos Flores, Imre Noth, Brian L. Yaspan, Gísli Jenkins, Louise V. Wain

2022Thorax123 citationsDOIOpen Access PDF

Abstract

Idiopathic pulmonary fibrosis (IPF) is a chronic lung condition with poor survival times. We previously published a genome-wide meta-analysis of IPF risk across three studies with independent replication of associated variants in two additional studies. To maximise power and to generate more accurate effect size estimates, we performed a genome-wide meta-analysis across all five studies included in the previous IPF risk genome-wide association studies. We used the distribution of effect sizes across the five studies to assess the replicability of the results and identified five robust novel genetic association signals implicating mTOR (mammalian target of rapamycin) signalling, telomere maintenance and spindle assembly genes in IPF risk.

Topics & Concepts

Idiopathic pulmonary fibrosisGenome-wide association studyMedicineGenetic associationGenomePulmonary fibrosisBioinformaticsGeneComputational biologyFibrosisLungGeneticsSingle-nucleotide polymorphismBiologyGenotypePathologyInternal medicineInterstitial Lung Diseases and Idiopathic Pulmonary FibrosisLung Cancer Treatments and MutationsEosinophilic Disorders and Syndromes
Genome-wide association study across five cohorts identifies five novel loci associated with idiopathic pulmonary fibrosis | Litcius