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Microbial Transcription Factor-Based Biosensors: Innovations from Design to Applications in Synthetic Biology

Kyeongseok Song, Hyunju Ji, Ji‐Won Lee, Youngdae Yoon

2025Biosensors13 citationsDOIOpen Access PDF

Abstract

Transcription factor-based biosensors (TFBs) are powerful tools in microbial biosensor applications, enabling dynamic control of metabolic pathways, real-time monitoring of intracellular metabolites, and high-throughput screening (HTS) for strain engineering. These systems use transcription factors (TFs) to convert metabolite concentrations into quantifiable outputs, enabling precise regulation of metabolic fluxes and biosynthetic efficiency in microbial cell factories. Recent advancements in TFB, including improved sensitivity, specificity, and dynamic range, have broadened their applications in synthetic biology and industrial biotechnology. Computational tools such as Cello have further revolutionized TFB design, enabling in silico optimization and construction of complex genetic circuits for integrating multiple signals and achieving precise gene regulation. This review explores innovations in TFB systems for microbial biosensors, their role in metabolic engineering and adaptive evolution, and their future integration with artificial intelligence and advanced screening technologies to overcome critical challenges in synthetic biology and industrial bioproduction.

Topics & Concepts

Synthetic biologyMetabolic engineeringBioproductionIn silicoSystems biologyBiochemical engineeringComputational biologyBiosensorComputer scienceRiboswitchBiologyBiotechnologyEngineeringGeneGeneticsGene expressionBiochemistryNon-coding RNAMicrobial Metabolic Engineering and BioproductionViral Infectious Diseases and Gene Expression in InsectsGene Regulatory Network Analysis