An Alternative Proposal for the Reaction Mechanism of Light-Dependent Protochlorophyllide Oxidoreductase
Pedro J. Silva, Qi Cheng
Abstract
hydrogen and to Tyr189. This binding pose was then used as a starting point for the testing of previous mechanistic proposals using time-dependent density functional theory. The quantum-chemical computations clearly showed that such mechanisms have prohibitively high activation energies. Instead, these computations showed the feasibility of an alternative mechanism initiated by excited-state electron transfer from the key Tyr189 to the substrate. This mechanism appears to agree with the extant experimental data and reinterprets the final protonation step as a proton transfer to the active site itself rather than to the product, aiming at regenerating it for another round of catalysis.
Topics & Concepts
ProtochlorophyllideOxidoreductaseChemistryProtonationElectron transferActive siteCatalytic cycleDensity functional theoryComputational chemistryPhotochemistrySubstrate (aquarium)HydrideExcited stateStereochemistryChemical physicsCatalysisEnzymeHydrogenPhysicsAtomic physicsOrganic chemistryIonGeologyOceanographyPhotosynthetic Processes and MechanismsMetal-Catalyzed Oxygenation MechanismsPhotoreceptor and optogenetics research