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A microRNA panel compared to environmental and polygenic scores for colorectal cancer risk prediction

Janhavi R. Raut, Ben Schöttker, Bernd Holleczek, Feng Guo, Megha Bhardwaj, Kaya Miah, Petra Schrotz‐King, Hermann Brenner

2021Nature Communications38 citationsDOIOpen Access PDF

Abstract

Circulating microRNAs (miRNAs) could improve colorectal cancer (CRC) risk prediction. Here, we derive a blood-based miRNA panel and evaluate its ability to predict CRC occurrence in a population-based cohort of adults aged 50-75 years. Forty-one miRNAs are preselected from independent studies and measured by quantitative-real-time-polymerase-chain-reaction in serum collected at baseline of 198 participants who develop CRC during 14 years of follow-up and 178 randomly selected controls. A 7-miRNA score is derived by logistic regression. Its predictive ability, quantified by the optimism-corrected area-under-the-receiver-operating-characteristic-curve (AUC) using .632+ bootstrap is 0.794. Predictive ability is compared to that of an environmental risk score (ERS) based on known risk factors and a polygenic risk score (PRS) based on 140 previously identified single-nucleotide-polymorphisms. In participants with all scores available, optimism-corrected-AUC is 0.802 for the 7-miRNA score, while AUC (95% CI) is 0.557 (0.498-0.616) for the ERS and 0.622 (0.564-0.681) for the PRS.

Topics & Concepts

Logistic regressionColorectal cancerReceiver operating characteristicOncologyMedicineInternal medicineArea under the curveSingle-nucleotide polymorphismPopulationCohortOptimismmicroRNAFramingham Risk ScoreCancerBiologyGeneticsPsychologyGenotypeDiseaseEnvironmental healthGeneSocial psychologyMicroRNA in disease regulationCancer-related molecular mechanisms researchCircular RNAs in diseases
A microRNA panel compared to environmental and polygenic scores for colorectal cancer risk prediction | Litcius