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Estimation of COVID-19 spread curves integrating global data and borrowing information

Se Yoon Lee, Bowen Lei, Bani K. Mallick

2020PLoS ONE172 citationsDOIOpen Access PDF

Abstract

Currently, novel coronavirus disease 2019 (COVID-19) is a big threat to global health. The rapid spread of the virus has created pandemic, and countries all over the world are struggling with a surge in COVID-19 infected cases. There are no drugs or other therapeutics approved by the US Food and Drug Administration to prevent or treat COVID-19: information on the disease is very limited and scattered even if it exists. This motivates the use of data integration, combining data from diverse sources and eliciting useful information with a unified view of them. In this paper, we propose a Bayesian hierarchical model that integrates global data for real-time prediction of infection trajectory for multiple countries. Because the proposed model takes advantage of borrowing information across multiple countries, it outperforms an existing individual country-based model. As fully Bayesian way has been adopted, the model provides a powerful predictive tool endowed with uncertainty quantification. Additionally, a joint variable selection technique has been integrated into the proposed modeling scheme, which aimed to identify possible country-level risk factors for severe disease due to COVID-19.

Topics & Concepts

PandemicCoronavirus disease 2019 (COVID-19)Computer scienceBayesian probabilityBig dataData miningVariable (mathematics)EconometricsGlobal healthData integrationDiseaseData scienceRisk analysis (engineering)Infectious disease (medical specialty)Artificial intelligenceMedicineMathematicsPublic healthMathematical analysisPathologyNursingCOVID-19 epidemiological studiesInfluenza Virus Research StudiesSARS-CoV-2 and COVID-19 Research
Estimation of COVID-19 spread curves integrating global data and borrowing information | Litcius