Litcius/Paper detail

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

Jian Hu, Xiangjie Li, Kyle Coleman, Amelia Schroeder, Nan Ma, David J. Irwin, Edward B. Lee, Russell T. Shinohara, Mingyao Li

2021Nature Methods1,099 citationsDOI

Topics & Concepts

Computational biologyGene expressionGeneBiologyGraphGene expression profilingContext (archaeology)TranscriptomeComputer scienceGeneticsTheoretical computer sciencePaleontologySingle-cell and spatial transcriptomicsGene expression and cancer classification
SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network | Litcius