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Imaging transcriptomics: Convergent cellular, transcriptomic, and molecular neuroimaging signatures in the healthy adult human brain

Daniel Martins, Alessio Giacomel, Steven Williams, Federico Turkheimer, Ottavia Dipasquale, Mattia Veronese

2021Cell Reports105 citationsDOIOpen Access PDF

Abstract

The integration of transcriptomic and neuroimaging data, "imaging transcriptomics," has recently emerged to generate hypotheses about potential biological pathways underlying regional variability in neuroimaging features. However, the validity of this approach is yet to be examined in depth. Here, we sought to bridge this gap by performing transcriptomic decoding of the regional distribution of well-known molecular markers spanning different elements of the biology of the healthy human brain. Imaging transcriptomics identifies biological and cell pathways that are consistent with the known biology of a wide range of molecular neuroimaging markers. The extent to which it can capture patterns of gene expression that align well with elements of the biology of the neuroinflammatory axis, at least in healthy controls without a proinflammatory challenge, is inconclusive. Imaging transcriptomics might constitute an interesting approach to improve our understanding of the biological pathways underlying regional variability in a wide range of neuroimaging phenotypes.

Topics & Concepts

NeuroimagingTranscriptomeNeuroscienceBiologySystems biologyHuman brainMolecular imagingComputational biologyPhenotypeGene expressionGeneGeneticsIn vivoNeuroinflammation and Neurodegeneration MechanismsSingle-cell and spatial transcriptomicsinterferon and immune responses
Imaging transcriptomics: Convergent cellular, transcriptomic, and molecular neuroimaging signatures in the healthy adult human brain | Litcius