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Engineering enzyme activity using an expanded amino acid alphabet

Zachary Birch-Price, Christopher J. Taylor, Mary Ortmayer, Anthony P. Green

2022Protein Engineering Design and Selection34 citationsDOIOpen Access PDF

Abstract

Enzyme design and engineering strategies are typically constrained by the limited size of nature's genetic alphabet, comprised of only 20 canonical amino acids. In recent years, site-selective incorporation of non-canonical amino acids (ncAAs) via an expanded genetic code has emerged as a powerful means of inserting new functional components into proteins, with hundreds of structurally diverse ncAAs now available. Here, we highlight how the emergence of an expanded repertoire of amino acids has opened new avenues in enzyme design and engineering. ncAAs have been used to probe complex biological mechanisms, augment enzyme function and, most ambitiously, embed new catalytic mechanisms into protein active sites that would be challenging to access within the constraints of nature's genetic code. We predict that the studies reviewed in this article, along with further advances in genetic code expansion technology, will establish ncAA incorporation as an increasingly important tool for biocatalysis in the coming years.

Topics & Concepts

Genetic codeComputational biologyAmino acidProtein engineeringAlphabetSynthetic biologyAminoacyl tRNA synthetaseFunction (biology)Directed evolutionBiologyEnzymeGeneticsBiochemistryTransfer RNAGeneRNAPhilosophyMutantLinguisticsChemical Synthesis and AnalysisRNA and protein synthesis mechanismsEnzyme Catalysis and Immobilization
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