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Clinical applications of next‐generation sequencing‐based <scp>ctDNA</scp> analyses in breast cancer: defining treatment targets and dynamic changes during disease progression

Eva Valentina Klocker, Samantha O. Hasenleithner, Rupert Bartsch, Simon Peter Gampenrieder, Daniel Egle, Christian F. Singer, Gabriel Rinnerthaler, Michael Hubalek, Katja Schmitz, Zsuzsanna Bagó-Horváth, Andreas Petzer, Sonja Heibl, Ellen Heitzer, Marija Balić, Michael Gnant

2024Molecular Oncology13 citationsDOIOpen Access PDF

Abstract

The advancements in the detection and characterization of circulating tumor DNA (ctDNA) have revolutionized precision medicine and are likely to transform standard clinical practice. The non-invasive nature of this approach allows for molecular profiling of the entire tumor entity, while also enabling real-time monitoring of the effectiveness of cancer therapies as well as the identification of resistance mechanisms to guide targeted therapy. Although the field of ctDNA studies offers a wide range of applications, including in early disease, in this review we mainly focus on the role of ctDNA in the dynamic molecular characterization of unresectable locally advanced and metastatic BC (mBC). Here, we provide clinical practice guidance for the rapidly evolving field of molecular profiling of mBC, outlining the current landscape of liquid biopsy applications and how to choose the right ctDNA assay. Additionally, we underline the importance of exploring the clinical relevance of novel molecular alterations that potentially represent therapeutic targets in mBC, along with mutations where targeted therapy is already approved. Finally, we present a potential roadmap for integrating ctDNA analysis into clinical practice.

Topics & Concepts

Liquid biopsyPrecision medicineCirculating tumor DNAMedicineClinical PracticeBreast cancerCancer MedicineProfiling (computer programming)Precision oncologyComputational biologyTargeted therapyMetastatic breast cancerDiseaseBioinformaticsOncologyCancerInternal medicineBiologyPathologyComputer scienceFamily medicineOperating systemCancer Genomics and DiagnosticsSingle-cell and spatial transcriptomicsMolecular Biology Techniques and Applications