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Diffusion of a disordered protein on its folded ligand

Felix Wiggers, Samuel Wohl, Artem Dubovetskyi, Gabriel Rosenblum, Wenwei Zheng, Hagen Hofmann

2021Proceedings of the National Academy of Sciences55 citationsDOIOpen Access PDF

Abstract

Significance Flexibility in complexes between intrinsically disordered proteins and folded ligands is widespread in nature. However, timescales and spatial amplitudes of such dynamics remained unexplored for most systems. Our results show that the disordered cytoplasmic tail of the cell adhesion protein E-cadherin diffuses across the entire surface of its folded binding partner β-catenin at fast submillisecond timescales. The nanometer amplitude of these motions could allow kinases to access their recognition motifs without requiring a dissociation of the complex. We expect that the rugged energy landscape found in the E-cadherin/β-catenin complex is a defining feature of dynamic and partially disordered protein complexes.

Topics & Concepts

Intrinsically disordered proteinsEnergy landscapeMicrosecondBiophysicsMolecular dynamicsDissociation (chemistry)Chemical physicsKineticsLigand (biochemistry)ChemistryConfined spacePhysicsBiologyReceptorComputational chemistryClassical mechanicsBiochemistryAstronomyPhysical chemistryOrganic chemistryProtein Structure and DynamicsRNA and protein synthesis mechanismsRNA Research and Splicing
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