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Prebiotic Catalytic Peptide Ligation Yields Proteinogenic Peptides by Intramolecular Amide Catalyzed Hydrolysis Facilitating Regioselective Lysine Ligation in Neutral Water

Jyoti Singh, Daniel Whitaker, Benjamin Thoma, Saidul Islam, Callum S. Foden, Abil E. Aliev, Tom D. Sheppard, Matthew W. Powner

2022Journal of the American Chemical Society28 citationsDOIOpen Access PDF

Abstract

primary thiols are the ideal catalysts. While the most rapid thiol catalyzed peptide ligation occurs at pH 8.5-9, the most selective peptide ligation, that tolerates all proteinogenic side chains, occurs at pH 7. We have also identified the highly selective mechanism by which the intermediate peptidyl amidines undergo hydrolysis to α-peptides while demonstrating that the hydrolysis of amidines with nonproteinogenic structures, such as β- and γ-peptides, displays poor selectivity. Notably, this discovery enables the highly α-selective protecting-group-free ligation of lysine peptides at neutral pH while leaving the functional ε-amine side chain intact.

Topics & Concepts

ChemistryPeptideChemical ligationNative chemical ligationCombinatorial chemistryAmine gas treatingLysineHydrolysisLigationAmideCatalysisPeptide bondSelectivityAmino acidStereochemistryOrganic chemistryCysteineBiochemistryEnzymeBiologyMolecular biologyChemical Synthesis and AnalysisOrigins and Evolution of LifeRNA and protein synthesis mechanisms
Prebiotic Catalytic Peptide Ligation Yields Proteinogenic Peptides by Intramolecular Amide Catalyzed Hydrolysis Facilitating Regioselective Lysine Ligation in Neutral Water | Litcius