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Protein pI and Intracellular Localization

Alexander A. Tokmakov, Atsushi Kurotani, Ken‐ichi Sato

2021Frontiers in Molecular Biosciences155 citationsDOIOpen Access PDF

Abstract

The protein isoelectric point (pI) can be calculated from an amino acid sequence using computational analysis in a good agreement with experimental data. Availability of whole-genome sequences empowers comparative studies of proteome-wide pI distributions. It was found that the whole-proteome distributions of protein pI values are multimodal in different species. It was further hypothesized that the observed multimodality is associated with subcellular localization-specific differences in local pI distributions. Here, we overview the multimodality of proteome-wide pI distributions in different organisms focusing on the relationships between protein pI and subcellular localization. We also discuss the probable factors responsible for variation of the intracellular localization-specific pI profiles.

Topics & Concepts

PiProteomeSubcellular localizationProtein subcellular localization predictionIsoelectric pointIntracellularBiologyComputational biologyBiochemistryCytoplasmEnzymeGeneAdvanced Proteomics Techniques and ApplicationsProtein Structure and DynamicsMachine Learning in Bioinformatics