Segmentation of Major Cerebral Vessel from MRA images and Evaluation using U-Net Family
Subhash Chandra Pal, Subhashis Banerjee, Dimitrios Toumpanakis, Johan Wikström, Robin Strand, Ashis Kumar Dhara
Abstract
Arterial cerebral vessel assessment is critical for the diagnosis of patients with cerebrovascular disease e.g., hypertension, Intracranial aneurysms, and dementia. Magnetic resonance angiography is a primary imaging technique for diagnosing cerebrovascular diseases. There are many Convolutional neural networks (CNN) based methods for cerebral vessel segmentation but lack to identify the target vessels and understand the arterial tree structure for diagnosis and endovascular surgical planning. In the present study, we generated annotations for major vessel segmentation and analyzed fully automatic segmentation of major vessels using state-of-the-art U-Net based deep learning models. Computer-aided major cerebral vessel segmentation incorporated into clinical practice may help speed up the diagnosis of time-critical vessel anomalies and help find important bio-markers for neurological dysfunction. We validated and compared U-Net based models for volumetric segmentation and prediction of cerebral arteries and it could be done in real-time without any image pre-processing.