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Multiple recent HCAR2 structures demonstrate a highly dynamic ligand binding and G protein activation mode

Aslihan Shenol, Ricardo Tenente, Michael Lückmann, Thomas M. Frimurer, Thue W. Schwartz

2024Nature Communications18 citationsDOIOpen Access PDF

Abstract

A surprisingly clear picture of the allosteric mechanism connecting G protein-coupled receptor agonists with G protein binding-and back - is revealed by a puzzle of thirty novel 3D structures of the hydroxycarboxylic acid receptor 2 (HCAR2) in complex with eight different orthosteric and a single allosteric agonist. HCAR2 is a sensor of β-hydroxybutyrate, niacin and certain anti-inflammatory drugs. Surprisingly, agonists with and without on-target side effects bound very similarly and in a completely occluded orthosteric binding site. Thus, despite the many structures we are still left with a pertinent need to understand the molecular dynamics of this and similar systems.

Topics & Concepts

Ligand (biochemistry)Computational biologyProtein structurePlasma protein bindingComputer scienceChemistryBiophysicsCell biologyBiologyReceptorBiochemistryReceptor Mechanisms and SignalingComputational Drug Discovery MethodsProtein Structure and Dynamics
Multiple recent HCAR2 structures demonstrate a highly dynamic ligand binding and G protein activation mode | Litcius