Litcius/Paper detail

Characteristics of circular RNAs expression of peripheral blood mononuclear cells in humans with coronary artery disease

Wenfeng Ji, Jiaxin Chen, Shu He, Yaqing Zhou, Lei Hua, Can Hou, Sheng Zhang, Xiongkang Gan, Yanjun Wang, Hanxiao Zhou, Qiang Li, En‐Zhi Jia

2021Physiological Genomics17 citationsDOI

Abstract

Circular RNAs (circRNAs) function as promising biomarkers and therapeutic targets for coronary artery disease due to their high stability, covalently closed structure, and potential gene regulation. We aimed to identify the expression profile and role of circular RNAs (circRNAs) in coronary artery disease (CAD). We performed RNA sequence analysis of circRNAs in peripheral blood mononuclear cells of five patients with CAD and five controls. Bioinformatics analyses were adopted to explore biological functions of differentially expressed circRNAs. The miRanda and TargetScan tools were used to predict the microRNA (miRNA)-targeting interactions and to construct a triple network of differentially expressed gene-circRNA-miRNA-mRNA. In total, 13,160 downregulated and 12,905 upregulated circRNAs were identified in CAD. A gene ontology annotation analysis showed that genes in the network were involved in organelle organization, cell cycle, mitotic cycle, and cellular metabolic process. Parental genes of the 10 dysregulated circRNAs were involved in metabolism and protein modification, and these circRNAs might regulate gene expression associated with CAD via miRNA sponges. As potential competing endogenous RNAs (ceRNAs), dysregulated circRNAs may be involved in the pathogenesis of CAD, which provides new insights into the diagnosis and prognosis of coronary artery disease.

Topics & Concepts

BiologymicroRNACircular RNACompeting endogenous RNAGeneCoronary artery diseaseGene expressionComputational biologyBioinformaticsRegulation of gene expressionCell cycleGeneticsRNALong non-coding RNAInternal medicineMedicineCircular RNAs in diseasesMicroRNA in disease regulation
Characteristics of circular RNAs expression of peripheral blood mononuclear cells in humans with coronary artery disease | Litcius