Litcius/Paper detail

The Open Reaction Database

Steven Kearnes, Michael Maser, Michael Wleklinski, Anton Kast, Abigail G. Doyle, Spencer D. Dreher, Joel M. Hawkins, Klavs F. Jensen, Connor W. Coley

2021Journal of the American Chemical Society345 citationsDOIOpen Access PDF

Abstract

Chemical reaction data in journal articles, patents, and even electronic laboratory notebooks are currently stored in various formats, often unstructured, which presents a significant barrier to downstream applications, including the training of machine-learning models. We present the Open Reaction Database (ORD), an open-access schema and infrastructure for structuring and sharing organic reaction data, including a centralized data repository. The ORD schema supports conventional and emerging technologies, from benchtop reactions to automated high-throughput experiments and flow chemistry. The data, schema, supporting code, and web-based user interfaces are all publicly available on GitHub. Our vision is that a consistent data representation and infrastructure to support data sharing will enable downstream applications that will greatly improve the state of the art with respect to computer-aided synthesis planning, reaction prediction, and other predictive chemistry tasks.

Topics & Concepts

Schema (genetic algorithms)StructuringComputer scienceSchema evolutionData sharingChemistryDatabase schemaDatabaseWorld Wide WebInformation retrievalDatabase designAlternative medicineEconomicsPathologyMedicineFinanceMachine Learning in Materials ScienceScientific Computing and Data ManagementInnovative Microfluidic and Catalytic Techniques Innovation