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Deep‐learning based super‐resolution for 3D isotropic coronary MR angiography in less than a minute

Thomas Küstner, Camila Muñoz, Alina Psenicny, Aurélien Bustin, Niccolò Fuin, Haikun Qi, Radhouène Neji, Karl Kunze, Reza Hajhosseiny, Claudia Prieto, René M. Botnar

2021Magnetic Resonance in Medicine78 citationsDOIOpen Access PDF

Abstract

Purpose To develop and evaluate a novel and generalizable super‐resolution (SR) deep‐learning framework for motion‐compensated isotropic 3D coronary MR angiography (CMRA), which allows free‐breathing acquisitions in less than a minute. Methods Undersampled motion‐corrected reconstructions have enabled free‐breathing isotropic 3D CMRA in ~5‐10 min acquisition times. In this work, we propose a deep‐learning–based SR framework, combined with non‐rigid respiratory motion compensation, to shorten the acquisition time to less than 1 min. A generative adversarial network (GAN) is proposed consisting of two cascaded Enhanced Deep Residual Network generator, a trainable discriminator, and a perceptual loss network. A 16‐fold increase in spatial resolution is achieved by reconstructing a high‐resolution (HR) isotropic CMRA (0.9 mm 3 or 1.2 mm 3 ) from a low‐resolution (LR) anisotropic CMRA (0.9 × 3.6 × 3.6 mm 3 or 1.2 × 4.8 × 4.8 mm 3 ). The impact and generalization of the proposed SRGAN approach to different input resolutions and operation on image and patch‐level is investigated. SRGAN was evaluated on a retrospective downsampled cohort of 50 patients and on 16 prospective patients that were scanned with LR‐CMRA in ~50 s under free‐breathing. Vessel sharpness and length of the coronary arteries from the SR‐CMRA is compared against the HR‐CMRA. Results SR‐CMRA showed statistically significant ( P < .001) improved vessel sharpness 34.1% ± 12.3% and length 41.5% ± 8.1% compared with LR‐CMRA. Good generalization to input resolution and image/patch‐level processing was found. SR‐CMRA enabled recovery of coronary stenosis similar to HR‐CMRA with comparable qualitative performance. Conclusion The proposed SR‐CMRA provides a 16‐fold increase in spatial resolution with comparable image quality to HR‐CMRA while reducing the predictable scan time to <1 min.

Topics & Concepts

Computer scienceArtificial intelligenceMedicineAdvanced MRI Techniques and ApplicationsCardiac Imaging and DiagnosticsAdvanced Image Processing Techniques
Deep‐learning based super‐resolution for 3D isotropic coronary MR angiography in less than a minute | Litcius