STGNNks: Identifying cell types in spatial transcriptomics data based on graph neural network, denoising auto-encoder, and <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" altimg="si5.svg" display="inline" id="d1e1084"><mml:mi>k</mml:mi></mml:math>-sums clustering
Lihong Peng, Xianzhi He, Xinhuai Peng, Zejun Li, Li Zhang
Topics & Concepts
Computer scienceGraphEncoderArtificial neural networkScalable Vector GraphicsArtificial intelligenceData miningPattern recognition (psychology)AlgorithmTheoretical computer scienceOperating systemSingle-cell and spatial transcriptomicsGene expression and cancer classificationBioinformatics and Genomic Networks