Litcius/Paper detail

Raman spectroscopy‐based detection of <scp>RNA</scp> viruses in saliva: A preliminary report

Sanket Desai, Saket V. Mishra, Asim Joshi, Debashmita Sarkar, Arti Hole, Rohit Mishra, Shilpee Dutt, Murali K. Chilakapati, Sudeep Gupta, Amit Dutt

2020Journal of Biophotonics54 citationsDOIOpen Access PDF

Abstract

Several non-invasive Raman spectroscopy-based assays have been reported for rapid and sensitive detection of pathogens. We developed a novel statistical model for the detection of RNA viruses in saliva, based on an unbiased selection of a set of 65 Raman spectral features that mostly attribute to the RNA moieties, with a prediction accuracy of 91.6% (92.5% sensitivity and 88.8% specificity). Furthermore, to minimize variability and automate the downstream analysis of the Raman spectra, we developed a GUI-based analytical tool "RNA Virus Detector (RVD)." This conceptual framework to detect RNA viruses in saliva could form the basis for field application of Raman Spectroscopy in managing viral outbreaks, such as the ongoing COVID-19 pandemic. (http://www.actrec.gov.in/pi-webpages/AmitDutt/RVD/RVD.html).

Topics & Concepts

Raman spectroscopyRNASalivaRNA extractionComputational biologyChemistryVirologyBiologyBiochemistryPhysicsOpticsGeneSpectroscopy Techniques in Biomedical and Chemical ResearchAnimal Virus Infections StudiesSARS-CoV-2 detection and testing
Raman spectroscopy‐based detection of <scp>RNA</scp> viruses in saliva: A preliminary report | Litcius