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Interpretation of cluster structures in pain‐related phenotype data using explainable artificial intelligence (XAI)

Jörn Lötsch, Sebastian Malkusch

2020European Journal of Pain21 citationsDOIOpen Access PDF

Abstract

BACKGROUND: In pain research and clinics, it is common practice to subgroup subjects according to shared pain characteristics. This is often achieved by computer-aided clustering. In response to a recent EU recommendation that computer-aided decision making should be transparent, we propose an approach that uses machine learning to provide (1) an understandable interpretation of a cluster structure to (2) enable a transparent decision process about why a person concerned is placed in a particular cluster. METHODS: Comprehensibility was achieved by transforming the interpretation problem into a classification problem: A sub-symbolic algorithm was used to estimate the importance of each pain measure for cluster assignment, followed by an item categorization technique to select the relevant variables. Subsequently, a symbolic algorithm as explainable artificial intelligence (XAI) provided understandable rules of cluster assignment. The approach was tested using 100-fold cross-validation. RESULTS: The importance of the variables of the data set (6 pain-related characteristics of 82 healthy subjects) changed with the clustering scenarios. The highest median accuracy was achieved by sub-symbolic classifiers. A generalized post-hoc interpretation of clustering strategies of the model led to a loss of median accuracy. XAI models were able to interpret the cluster structure almost as correctly, but with a slight loss of accuracy. CONCLUSIONS: Assessing the variables importance in clustering is important for understanding any cluster structure. XAI models are able to provide a human-understandable interpretation of the cluster structure. Model selection must be adapted individually to the clustering problem. The advantage of comprehensibility comes at an expense of accuracy.

Topics & Concepts

Interpretation (philosophy)Cluster (spacecraft)PhenotypeArtificial intelligenceData miningComputer scienceComputational biologyBiologyGeneticsGeneProgramming languageExplainable Artificial Intelligence (XAI)Machine Learning in HealthcareBiomedical Text Mining and Ontologies
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