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Theoretical Studies on the Competing Mechanism and Origin of Diastereoselectivity of NHC-Catalyzed Intramolecular [3 + 2] Annulations of Ynals

Chunhui Liu, Xusheng Zhang, Peilin Han, Yujiao Hou, Shixing Zhang, Suxiang Ge, Dapeng Li, Yubo Jiang, Yongyuan Li

2025The Journal of Physical Chemistry A11 citationsDOI

Abstract

Chiral tricyclic 6,5,5-fused rings exhibit structural diversity and possess important biological activities in the synthesis of natural products. However, predicting the possible mechanism and origin of stereoselectivity in these reactions remains a challenge. In this article, we conducted a theoretical investigation into the NHC-catalyzed intramolecular [3 + 2] annulations of ynals to generate tricyclic 6,5,5-fused rings. Our calculations revealed that NHC could nucleophilically attack the carbonyl group of the ynal reactant, leading to the formation of a Breslow intermediate via a 1,2-proton transfer. Subsequently, an intramolecular Michael addition takes place, resulting in a 6-5 bicyclic intermediate. We then compared the competitive processes involving proton transfer and the Mannich reaction. The more energetically favorable process involves an HOAc-assisted proton transfer process, followed by the Mannich reaction. To ascertain the origin of the diastereoselectivity, we performed noncovalent interaction (NCI) and atom-in-molecule (AIM) analyses. This work is useful for understanding the general principles and detailed mechanisms of the synthesis of chiral 6,5,5-fused tricyclic scaffolds with unique diastereoselectivity.

Topics & Concepts

Intramolecular forceMechanism (biology)CatalysisChemistryPhilosophyStereochemistryEpistemologyOrganic chemistryN-Heterocyclic Carbenes in Organic and Inorganic ChemistryCatalytic Cross-Coupling ReactionsCatalytic Alkyne Reactions