Identification of cell types in multiplexed in situ images by combining protein expression and spatial information using CELESTA
Weiruo Zhang, Irene Li, Nathan E. Reticker-Flynn, Zinaida Good, Serena Chang, Nikolay Samusik, Saumyaa Saumyaa, Yuanyuan Li, Xin Zhou, Rachel Liang, Christina S. Kong, Quynh‐Thu Le, Andrew J. Gentles, John B. Sunwoo, Garry P. Nolan, Edgar G. Engleman, Sylvia K. Plevritis
Topics & Concepts
In situIdentification (biology)Computational biologyProtein expressionMultiplexingExpression (computer science)Computer scienceSpatial analysisBiologyPattern recognition (psychology)Artificial intelligenceChemistryBiochemistryRemote sensingGeneGeographyProgramming languageTelecommunicationsOrganic chemistryBotanySingle-cell and spatial transcriptomicsCell Image Analysis TechniquesGene expression and cancer classification