Litcius/Paper detail

Absolutely robust controllers for chemical reaction networks

Jinsu Kim, German Enciso

2020Journal of The Royal Society Interface22 citationsDOIOpen Access PDF

Abstract

In this work, we design a type of controller that consists of adding a specific set of reactions to an existing mass-action chemical reaction network in order to control a target species. This set of reactions is effective for both deterministic and stochastic networks, in the latter case controlling the mean as well as the variance of the target species. We employ a type of network property called absolute concentration robustness (ACR). We provide applications to the control of a multisite phosphorylation model as well as a receptor-ligand signalling system. For this framework, we use the so-called deficiency zero theorem from chemical reaction network theory as well as multiscaling model reduction methods. We show that the target species has approximately Poisson distribution with the desired mean. We further show that ACR controllers can bring robust perfect adaptation to a target species and are complementary to a recently introduced antithetic feedback controller used for stochastic chemical reactions.

Topics & Concepts

Robustness (evolution)Control theory (sociology)Robust controlPoisson distributionComputer scienceController (irrigation)Chemical processStochastic processSignallingMathematical optimizationChemical reactorMathematicsChemical reactionSet (abstract data type)Property (philosophy)Probability distributionReduction (mathematics)Biological systemHomogeneity (statistics)Topology (electrical circuits)Network topologyControl (management)Network modelGene Regulatory Network AnalysisModel Reduction and Neural NetworksMachine Learning in Materials Science