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g_elpot: A Tool for Quantifying Biomolecular Electrostatics from Molecular Dynamics Trajectories

Andrei Yu. Kostritskii, Claudia Alleva, Saskia Cönen, Jan‐Philipp Machtens

2021Journal of Chemical Theory and Computation15 citationsDOIOpen Access PDF

Abstract

, and DNA complexed with cationic polymers. Our results indicate that g_elpot is well suited for quantifying electrostatics in biomolecular systems to provide a deeper understanding of its role in biomolecular processes.

Topics & Concepts

ElectrostaticsBiomoleculeMolecular dynamicsStatic electricityMolecular biophysicsNanotechnologyBiomolecular structureChemistryChemical physicsBiological systemProtein structurePhysicsMaterials scienceComputational chemistryBiologyPhysical chemistryQuantum mechanicsBiochemistryProtein Structure and DynamicsDNA and Nucleic Acid ChemistryRNA and protein synthesis mechanisms
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