Litcius/Paper detail

Cartesian message passing neural networks for directional properties: Fast and transferable atomic multipoles

Zachary L. Glick, Alexios Koutsoukas, Daniel L. Cheney, C. David Sherrill

2021The Journal of Chemical Physics27 citationsDOIOpen Access PDF

Abstract

The message passing neural network (MPNN) framework is a promising tool for modeling atomic properties but is, until recently, incompatible with directional properties, such as Cartesian tensors. We propose a modified Cartesian MPNN (CMPNN) suitable for predicting atom-centered multipoles, an essential component of ab initio force fields. The efficacy of this model is demonstrated on a newly developed dataset consisting of 46 623 chemical structures and corresponding high-quality atomic multipoles, which was deposited into the publicly available Molecular Sciences Software Institute QCArchive server. We show that the CMPNN accurately predicts atom-centered charges, dipoles, and quadrupoles and that errors in the predicted atomic multipoles have a negligible effect on multipole-multipole electrostatic energies. The CMPNN is accurate enough to model conformational dependencies of a molecule's electronic structure. This opens up the possibility of recomputing atomic multipoles on the fly throughout a simulation in which they might exhibit strong conformational dependence.

Topics & Concepts

Multipole expansionCartesian coordinate systemDipoleAtom (system on chip)Ab initioPhysicsArtificial neural networkEnergetic neutral atomComputer scienceAtomic physicsQuantum mechanicsIonArtificial intelligenceGeometryMathematicsEmbedded systemMachine Learning in Materials ScienceComputational Drug Discovery MethodsProtein Structure and Dynamics