Taxonomic annotation of 16S rRNA sequences of pig intestinal samples using MG-RAST and QIIME2 generated different microbiota compositions
Joana Lima, Tim Manning, Kenny Rutherford, E.T. Baima, R.J. Dewhurst, Paul Walsh, R. Roehe
Topics & Concepts
Operational taxonomic unitBiologyAmpliconMetagenomicsPhylum16S ribosomal RNATaxonomic rankPhylogenetic treeSpecies richnessMicrobiomeDNA sequencingGenusComputational biologyTaxonZoologyGeneticsEcologyPolymerase chain reactionGeneGut microbiota and healthProbiotics and Fermented FoodsGenomics and Phylogenetic Studies